[ADD] Now the stub even compiles! => ship it!

doc/developer/doxygenConfig

@@ -616,7 +616,9 @@ EXCLUDE                = src/dataHandler/io/nifti \
                          src/dataHandler/io/biosig \
                          src/dataHandler/io/biosigWin \
                          src/dataHandler/io/libeep \
-                         src/common/platformDependent/visualStudio/inttypes.h
+                         src/common/platformDependent/visualStudio/inttypes.h \
+                         src/modules/lic/fibernavigator \
+                         src/modules/lic/fantom
 
 # The EXCLUDE_SYMLINKS tag can be used select whether or not files or
 # directories that are symbolic links (a Unix filesystem feature) are excluded

src/CMakeLists.txt

@@ -216,7 +216,7 @@ ADD_CUSTOM_TARGET( tags DEPENDS ctags DEPENDS cscope )
 FILE( GLOB_RECURSE STYLE_CPP ${PROJECT_SOURCE_DIR}/*.cpp )
 FILE( GLOB_RECURSE STYLE_H ${PROJECT_SOURCE_DIR}/*.h )
 # Set dirs to exclude from stylecheck
-SET( EXCLUDE_DIRS "/dataHandler/io/nifti/;/dataHandler/io/biosig/;/dataHandler/io/biosigWin/;/dataHandler/io/biosig/XMLParser/;/dataHandler/io/biosigWin/XMLParser/;/dataHandler/io/libeep/avr/;/dataHandler/io/libeep/cnt/;/dataHandler/io/libeep/eep/;/common/platformDependent/visualStudio/" )
+SET( EXCLUDE_DIRS "/dataHandler/io/nifti/;/dataHandler/io/biosig/;/dataHandler/io/biosigWin/;/dataHandler/io/biosig/XMLParser/;/dataHandler/io/biosigWin/XMLParser/;/dataHandler/io/libeep/avr/;/dataHandler/io/libeep/cnt/;/dataHandler/io/libeep/eep/;/common/platformDependent/visualStudio/;/modules/lic/fibernavigator/;/modules/lic/fantom/" )
 FOREACH( dirname ${EXCLUDE_DIRS} )
     FILE( GLOB EXCLUDE_H   ${PROJECT_SOURCE_DIR}${dirname}*.h )
     FILE( GLOB EXCLUDE_CPP ${PROJECT_SOURCE_DIR}${dirname}*.cpp )

src/modules/lic/fibernavigator/FStreamlineOnSurfaceEuler.cpp

@@ -31,7 +31,7 @@ F::FVector lastDirectionVector(3);
 //---------------------------------------------------------------------------
 #if 1
 
-FStreamlineOnSurfaceEuler::FStreamlineOnSurfaceEuler(const WDataSetVector& vectors, TriangleMesh* mesh )
+FStreamlineOnSurfaceEuler::FStreamlineOnSurfaceEuler( boost::shared_ptr< WDataSetVector > vectors, TriangleMesh* mesh )
     : allSteps(),
       steps(),
       allNormals(),

src/modules/lic/fibernavigator/FStreamlineOnSurfaceEuler.h

@@ -92,7 +92,7 @@ public:
     };
 
 
-    FStreamlineOnSurfaceEuler( const WDataSetVector& vectors, TriangleMesh* mesh );
+    FStreamlineOnSurfaceEuler( boost::shared_ptr< WDataSetVector > vectors, TriangleMesh* mesh );
     virtual ~FStreamlineOnSurfaceEuler();
 
 
@@ -164,7 +164,7 @@ protected:
 
 protected:
 
-	const WDataSetVector& m_vectors;
+    boost::shared_ptr< WDataSetVector > m_vectors;
 	TensorField* m_tensorField;
     TriangleMesh* m_mesh;
 

src/modules/lic/fibernavigator/SurfaceLIC.cpp

@@ -10,11 +10,11 @@
 #include "SurfaceLIC.h"
 #include "../fantom/FTensor.h"
 
-SurfaceLIC::SurfaceLIC( const WDataSetVector& vectors, boost::shared_ptr< WTriangleMesh2 > mesh )
+SurfaceLIC::SurfaceLIC( boost::shared_ptr< WDataSetVector > vectors, boost::shared_ptr< WTriangleMesh2 > mesh )
     : m_vectors( vectors )
 {
-    WAssert( boost::shared_dynamic_cast< WGridRegular3D >( vectors.getGrid() ), "Only vector field with regular grid are allowed... aborting" );
-    m_mesh = new TriangleMesh( mesh, boost::shared_dynamic_cast< WGridRegular3D >( vectors.getGrid() ) );
+    WAssert( boost::shared_dynamic_cast< WGridRegular3D >( vectors->getGrid() ), "Only vector field with regular grid are allowed... aborting" );
+    m_mesh = new TriangleMesh( mesh, boost::shared_dynamic_cast< WGridRegular3D >( vectors->getGrid() ) );
 
     nbFold = 20;
     max_length = 10.;

src/modules/lic/fibernavigator/SurfaceLIC.h

@@ -18,7 +18,7 @@
 class SurfaceLIC
 {
 public:
-    SurfaceLIC( const WDataSetVector &vectors, boost::shared_ptr< WTriangleMesh2 > mesh );
+    SurfaceLIC( boost::shared_ptr< WDataSetVector > vectors, boost::shared_ptr< WTriangleMesh2 > mesh );
     virtual ~SurfaceLIC();
     virtual void execute();
     std::vector< std::vector<float> > testLines;
@@ -29,7 +29,7 @@ private:
     {
     public:
 
-        MyLICStreamline( const WDataSetVector &vectors, TriangleMesh* mesh )
+        MyLICStreamline( boost::shared_ptr< WDataSetVector > vectors, TriangleMesh* mesh )
             : FStreamlineOnSurfaceEuler( vectors, mesh )
         {
         }
@@ -56,7 +56,7 @@ private:
         positive threshold;
     };
 
-    const WDataSetVector& m_vectors;
+    boost::shared_ptr< WDataSetVector > m_vectors;
     TriangleMesh* m_mesh;
     int nbTriangles;
 

src/modules/lic/fibernavigator/TensorField.cpp

@@ -42,7 +42,7 @@ TensorField::~TensorField()
 FTensor TensorField::getInterpolatedVector(float x, float y, float z)
 {
     bool success = false;
-    wmath::WVector3D result = m_vectors->interpolate( wmath::WPosition( x, y, z ), success );
+    wmath::WVector3D result = m_vectors->interpolate( wmath::WPosition( x, y, z ), &success );
     WAssert( success, "Vector interpolation was not successful" );
     return FTensor( FArray( result[0], result[1], result[2] ) );